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Gene detail [Fasta]

Species Anopheles coluzzii
GeneACOM028055
Positionscf_1925491372:109550..117670[GBrowse]
VectorBasehttp://www.vectorbase.org/search/site/ACOM028055
Gene Expressionhttps://www.vectorbase.org/expression-browser/gene/ACOM028055
sequence mRNA:
>ACOM028055-RA
ATGAGCCAGACAAAAGAGGATAAAAGTGATTCGGAAAATGAATCCAGCAGCGGTGGCAGTAAAAGCGGCTCATCCTCCGA
CTCCGAGAGCGAATCCGGCTCCGGCTCGTCCAGCTCGAGCTCGAGCGACAACGAGCACGACGCGTCCAACAACAACAATG
GGTTGAGCCGGAATACCAGCGGCACGACCTCCACCACTACCCACAACACGTCCACCGGTTCGAGCGGAAGCGATTTGCGC
AACTCGCGGACAGAGAATGGACTTTCCGACAGCAAATCCAGCCTCAACCGACACGATGAGCAGGGGGAGGATGAGGAAGA
GGAGGAGGAGGACGACGACGATCGGAACGACTCCGATGAGGACGCATCGATGGGCGGCGGCAATGAGCGGGTAGGCGCTG
GCGCTAACCATCATACGCATACGCACCCATCGGCGCAAAACAGTCACAGTAGGCCTGCGGGTCGAAGCTCGTCACACTCG
GGCAGCGATTCGGAGGAGAGTGGGGGAGAGGACCCCGCACACACAAACGGACCGGATGGGCACAATGCATCCGGCGACGA
TGAAGACGAGGAGGAGGAAGACGAGGATGAGGATGAGGAGGAAGCGCAACAGTCGTCGAAAAGCAGCTACGATGACGAGG
ATTACGCGGCCAACAAGCTGAGGCGCAAAAGTGCGCGAAAGAAGGCGGTGGCCGCAGCCCGGAAACGACCCGCCGCCCAG
CCCACGTCGAAAGCGAAGAAGAAGAAAAGCTCCAACAATCGATGGAAGTCGGAAACGTCCGAAAGTGATGGCAGCGATGG
AGATTCGGACGATTCGCGGGAGCAGCGCCACCGGCGGAAACCTTCCGGCGCAGCGGCGGCAGCAGCAGCGGCAGCGAAAA
AACGTTCCACCACATCCAATGCCAAATCGAAGGCGGCAGCGGCAGCCTCGAAGAAGAAGAAATCGAATGCGTACAGCTCG
GACGACGGCAGCAACAGTGACGACGATCGGAAGCGATCCTCAGCCGCGACGCGCCGGAAGAACAACACCGTCAGCTACAA
GGAGGAGAGCGGTGACGAACCGACGGACAGCGACGACCTGCTGGAGGTGGACCAGGAAGCGGAGGAGGCTGCGGCGGCCC
TGGCCGCCGAGGAGGAGAAGGCGGAAACGATCGAGCGCATTATTGGGCGGCGGAAGGGCCGACGGGGTGCGACCGGTGCC
GTGACGACGGTGTACGCGATCGAGGAGAACGGCGACCCGAACGTGCTCGGGGGCGAGCAGCAGGAGGAGGAGGAGGAGGA
ACAGTTTCTGATCAAGTGGACGGGCTGGTCGTACCTGCACTGCACCTGGGAGTCGGAGGAGACGCTGCGCGAGCAGAAGG
TAAAGGGCATGAAGAAGCTGGAGAACTACATCAAGCGCGAGCAGCAGCTGGAGTACTGGCGCAAGTATCAGGCCNNNNNN
NNNNNNNNNNNNNNNNAGGCGGAGGAGGGCGACAGCGGGCTGGAGTATCTGTGCAAGTGGGAGTCGCTGCCGTACTCGGA
CTCGACCTGGGAGGACGCCGGGCTGATCCGGCGCAAGTGGCAGCAGAAGATCGTGGAGTTTCACGAGCGGGAGGAGTCGC
GCCGGACGCCCTCGAAGCACTGCAAGGCGATACGGTACCGGCCGAACTTTAAGCACCTGAAGCAGCAGCCCGAGTATCTC
GGCGAGGAGCGCGGTCTGAAGCTGCGCGACTACCAGATGGACGGGCTGAACTGGCTCATCCTGACGTGGTGCAAGGACAA
CTCGGTCATCCTGGCGGACGAGATGGGGCTCGGCAAGACGATCCAGACGATCTGCTTCCTCTACTACCTGTTCAAGTCGC
AGCAGCTGTACGGGCCGTTCCTGTGCGTGGTGCCGCTGAGCACGATGCCGGCCTGGCAGCGCGAGTTCGGCATCTGGGCG
CCGGAGCTGAACGTGGTCACGTACCTGGGCGATGTGCAGTCGCGCGAGATCATCCGGCAGTACGAGTGGTGCTACGAAAG
CACGAAGAAGCTCAAGTTCAACGCGATCCTCACCACGTACGAGATACTGCTGAAGGACAAAACGTTCCTCGGCTCGATCG
GGTGGGCCTCGCTGCTGGTGGACGAGGCCCATCGGCTGAAGAACGACGATTCGCTGCTGTACAAGGCGCTGAAGGAGTTC
GACACGAACCACCGGCTGCTGATCACCGGCACGCCGCTGCAAAACTCGCTCAAGGAGCTGTGGGCGCTGCTGCACTTCAT
CATGCCGGAGCGGTTCGAGTCGTGGGACGACTTCGAGCGCAACTACGGCAACACGACGAACGACAAGAGCTACACCAAGC
TGCACAAGGAGCTGGAACCGTACATACTGCGCCGGGTGAAGAAGGACGTGGAGAAGAGCCTACCGGCGAAGGTCGAGCAG
ATACTGCGCGTGGAGATGACGTCGATCCAGCGGCAGTACTACAAGTGGATCCTGTCGAAAAACTTTGACGCGCTGCGCAA
GGGCATGAAGGGTTCGGTCGGCACGTTTCTGAACATCGTGATCGAGCTGAAGAAGTGCTGCAACCATGCGGCGCTGACGC
GCCCGATCGAGTTCGAGACGCAGCGCAACAGCCAGCAGGACGTGAAGGACAAAAAGAAATCAAAAAAGGACCGGCAGAAG
GATGCAAAGAAGGACAAGAAGAACAAAAACACGGGCCCGATGCATTTCACCGCGAACAATGAACCGTGCGCCCTGAACAT
ACTGGGCGATCTCGATCCGACCGTGTTCAACGAGTGCAAGGAAAAGATGCGCCCGGTGAAGAAGGCGCTGAAGACGCTGG
ACAACCCGGACGAGTCGCTGTCGCAGGAGGAGCAGCTGCGGCAGACGCGCGCCTGCCTGCTGAGCATCGGCGACCAGATC
AACCTGTGCCTGGCCGAGTACCGCGATCCGGAGAAGGCGAAGGAGTGGCGCAGCAACCTGTGGTACTTTGTGTCGAAGTT
TACCGAGTTCGATGCGCGCAAGCTGTTCAAGCTGTACAAGCACGCGCTGAAGCGTTCCGAGGGGTCGGCCGCGTCCGGTG
GGGAAGCGGGCGGTGGTGGTGGTGGTGGCACCACAAACTCACCGCCTGTCAAGGGAGACGGCAACATTGGTGGGAAGGGC
ATGAAAGCTGGCACGAAGAAAGACAACGGGCACGGTGAGGCTGGTGCGCCGCCGGGCGACAGTGCGGACGAGGGCAAGGG
TGGTGGGTCGCGGCGCGATCGAAAGGAGAAGAAGCGGCACCATCATCACCATTCGCACCATCCGGGCGGCGGTATTGGCG
GGCCGATTATGAGTGATTCGGCGCTGCAGCAGCGGGAGCGCTACCAGCAGCAGCAGCAGTCGGCGGTCGGTGGTGGTGAT
AATAGCCATCATGGGTCGGATGCTGTTAGTGCCGGTGGCCCGAAGGACGATAGCTCATCCACGATGCATTCCAAGCGGCG
GCTCGAGGAGGGAGAGTACGACGAAAATAGCAAAGAGTACAAACGGCTGCACGGCGATAGTCGCAGCAGTCATCGGGATC
GGGACAAGAAGTGGGACGAGTACGGGTCGGAGCGGGACCGCATGCGAAACGTACCACCGTCGTCCAGGGGCAGTGCACCG
GGTACGCCGCAAAGCATGCGCGGCGCCTATCCGGACGAACGGAGCCCAGCCCCGTACCCTGCCGATGGTGGTGCCTGGCT
TTCGGGCCGGATCATAAACGGGACCGGTACGACGGTTACGGCAGCAGCAGACACTCCTCCTCCTCCGGCGGCTACCATCG
CGATCGGGATCGTGAGCGCGATCGGGACCGGGATCGAGATCGGGAGCGGGACCGTGATCGGGACCGTGACAGGGATCGCG
ACCGTGACCGGGGTACCCTCCACCCGGTTCTGGCGGTTATTCCGGTGGCCACGGTTACGCGACAGCTCCTACCGCTATCC
GATGGGCAGTGGCGGCGGCGGCGGTGGCTATCCTCCCTCATCGCGCCCGTCCGGTACGGCACCACCGGTCGCGGTGGTAA
TGCCCACCGGGGCCGGTGGTGGTGTGGTGGCCGCCCCCGGTGTAGTGGTACCACCCGCGGACTATCTCGACTATCGACGT
TCGGAGTACGATCGAAGGCCACCGCCAGCGGCAAATAATTAA
PEP:
>ACOM028055-PA
MSQTKEDKSDSENESSSGGSKSGSSSDSESESGSGSSSSSSSDNEHDASNNNNGLSRNTSGTTSTTTHNTSTGSSGSDLR
NSRTENGLSDSKSSLNRHDEQGEDEEEEEEDDDDRNDSDEDASMGGGNERVGAGANHHTHTHPSAQNSHSRPAGRSSSHS
GSDSEESGGEDPAHTNGPDGHNASGDDEDEEEEDEDEDEEEAQQSSKSSYDDEDYAANKLRRKSARKKAVAAARKRPAAQ
PTSKAKKKKSSNNRWKSETSESDGSDGDSDDSREQRHRRKPSGAAAAAAAAAKKRSTTSNAKSKAAAAASKKKKSNAYSS
DDGSNSDDDRKRSSAATRRKNNTVSYKEESGDEPTDSDDLLEVDQEAEEAAAALAAEEEKAETIERIIGRRKGRRGATGA
VTTVYAIEENGDPNVLGGEQQEEEEEEQFLIKWTGWSYLHCTWESEETLREQKVKGMKKLENYIKREQQLEYWRKYQAXX
XXXXXXAEEGDSGLEYLCKWESLPYSDSTWEDAGLIRRKWQQKIVEFHEREESRRTPSKHCKAIRYRPNFKHLKQQPEYL
GEERGLKLRDYQMDGLNWLILTWCKDNSVILADEMGLGKTIQTICFLYYLFKSQQLYGPFLCVVPLSTMPAWQREFGIWA
PELNVVTYLGDVQSREIIRQYEWCYESTKKLKFNAILTTYEILLKDKTFLGSIGWASLLVDEAHRLKNDDSLLYKALKEF
DTNHRLLITGTPLQNSLKELWALLHFIMPERFESWDDFERNYGNTTNDKSYTKLHKELEPYILRRVKKDVEKSLPAKVEQ
ILRVEMTSIQRQYYKWILSKNFDALRKGMKGSVGTFLNIVIELKKCCNHAALTRPIEFETQRNSQQDVKDKKKSKKDRQK
DAKKDKKNKNTGPMHFTANNEPCALNILGDLDPTVFNECKEKMRPVKKALKTLDNPDESLSQEEQLRQTRACLLSIGDQI
NLCLAEYRDPEKAKEWRSNLWYFVSKFTEFDARKLFKLYKHALKRSEGSAASGGEAGGGGGGGTTNSPPVKGDGNIGGKG
MKAGTKKDNGHGEAGAPPGDSADEGKGGGSRRDRKEKKRHHHHHSHHPGGGIGGPIMSDSALQQRERYQQQQQSAVGGGD
NSHHGSDAVSAGGPKDDSSSTMHSKRRLEEGEYDENSKEYKRLHGDSRSSHRDRDKKWDEYGSERDRMRNVPPSSRGSAP
GTPQSMRGAYPDERSPAPYPADGGAWLSGRIINGTGTTVTAAADTPPPPAATIAIGIVSAIGTGIEIGSGTVIGTVTGIA
TVTGVPSTRFWRLFRWPRLRDSSYRYPMGSGGGGGGYPPSSRPSGTAPPVAVVMPTGAGGGVVAAPGVVVPPADYLDYRR
SEYDRRPPPAANN
Swiss-ProtChromodomain-helicase-DNA-binding protein 1
KEGG     K11367     
SUPERFAMILYSSF54160  Chromo domain-like superfamily     
Gene3DG3DSA:3.40.50.300     
PfamPF00176  SNF2_N; SNF2 family N-terminal domain     
SMARTSM00487     
ProSiteProfilesPS51192  HELICASE_ATP_BIND_1; Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.     
CoilsCoil
ProSitePatternsPS00598  CHROMO_1; Chromo domain signature.     
PANTHERPTHR10799

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