Data -> Musca domestica
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Resource | [Genomic] [GFF3] [mRNA] [Protein] |
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Data source | NCBI |
Publication | Scott, J. G. et al. Genome of the house fly, Musca domestica L., a global vector of diseases with adaptations to a septic environment. Genome biology 15, 466, doi:10.1186/s13059-014-0466-3 (2014). [PDF] |
Organism strain | "aabys" |
Assembly | |
Genomic Size | 728 Mb |
GC content | 38.35% |
Number of scaffolds | 20,487 |
Scaffold N50 | 226,573 |
Number of contigs | 104,054 |
Contig N50 | 11,807 |
Gene Set | |
Gene | 20,165 |
Protein | 19,549 |
BioSample | SAMN02953849 |
Submitter | Glossina Genomes Consortium |
Assembly level | Scaffold |
GenBank assembly accession | GCA_000371365.1 |
RefSeq assembly accession | GCF_000371365.1 |
WGS Project | AQPM01 |
Assembly method | AllPathsLG v. September 2012 |
Sequencing technology | Illumina |
Tissue | all development stages whole body |
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Year | |
Platform | |
Layout | |
Raw reads | |
Data accession | SRR1045112 |
Assemble software | Trinity 2011 |
Contigs | 46,167 |
Annotated | |
Reference | |
Download | [Fasta] |