Data -> Musca domestica
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| Resource | [Genomic] [GFF3] [mRNA] [Protein] |
|---|---|
| Data source | NCBI |
| Publication | Scott, J. G. et al. Genome of the house fly, Musca domestica L., a global vector of diseases with adaptations to a septic environment. Genome biology 15, 466, doi:10.1186/s13059-014-0466-3 (2014). [PDF] |
| Organism strain | "aabys" |
| Assembly | |
| Genomic Size | 728 Mb |
| GC content | 38.35% |
| Number of scaffolds | 20,487 |
| Scaffold N50 | 226,573 |
| Number of contigs | 104,054 |
| Contig N50 | 11,807 |
| Gene Set | |
| Gene | 20,165 |
| Protein | 19,549 |
| BioSample | SAMN02953849 |
| Submitter | Glossina Genomes Consortium |
| Assembly level | Scaffold |
| GenBank assembly accession | GCA_000371365.1 |
| RefSeq assembly accession | GCF_000371365.1 |
| WGS Project | AQPM01 |
| Assembly method | AllPathsLG v. September 2012 |
| Sequencing technology | Illumina |
| Tissue | all development stages whole body |
|---|---|
| Year | |
| Platform | |
| Layout | |
| Raw reads | |
| Data accession | SRR1045112 |
| Assemble software | Trinity 2011 |
| Contigs | 46,167 |
| Annotated | |
| Reference | |
| Download | [Fasta] |
