Data -> Ceratitis capitata
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| Resource | [Genomic] [GFF3] [mRNA] [Protein] |
|---|---|
| Data source | NCBI |
| Publication | |
| Organism strain | |
| Assembly | |
| Genomic Size | 469 Mb |
| GC content | 41.26% |
| Number of scaffolds | 1,824 |
| Scaffold N50 | 4,060,615 |
| Number of contigs | 25,561 |
| Contig N50 | 45,711 |
| Gene Set | |
| Gene | 23,710 |
| Protein | 23,087 |
| BioSample | SAMN02953830 |
| Submitter | The i5k Initiative |
| Assembly level | Scaffold |
| GenBank assembly accession | GCA_000347755.1 |
| RefSeq assembly accession | GCF_000347755.1 |
| WGS Project | AOHK01 |
| Assembly method | AllPaths v. 35218; ATLAS-link v. 1.0; ATLAS-gapfill v. 2.2 |
| Sequencing technology | Illumina HiSeq |
| Tissue | the pupal stage and adult male stage : whole body |
|---|---|
| Year | |
| Platform | |
| Layout | |
| Raw reads | |
| Data accession | SRR915830 SRR915831 SRR915832 SRR915833 SRR915835 SRR915836 SRR915834 SRR915837 SRR915838 SRR915839 SRR915840 SRR915844 SRR915845 SRR915846 SRR915848 SRR915850 SRR915851 SRR915852 |
| Assemble software | Trinity r2012-10-05 |
| Contigs | 21,761 |
| Annotated | |
| Reference | |
| Download | [Fasta] |
