Data -> Bombus terrestris
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| Resource | [Genomic] [GFF3] [mRNA] [Protein] |
|---|---|
| Data source | NCBI |
| Publication | |
| Organism strain | |
| Assembly | |
| Genomic Size | 241 Mb |
| GC content | 42.13% |
| Number of scaffolds | 5,609 |
| Scaffold N50 | 12,868,932 |
| Number of contigs | 10,672 |
| Contig N50 | 76,043 |
| Gene Set | |
| Gene | 21,558 |
| Protein | 20,320 |
| BioSample | SAMN00009041 |
| Submitter | Baylor College of Medicine |
| Assembly level | Chromosome |
| GenBank assembly accession | GCA_000214255.1 |
| RefSeq assembly accession | GCF_000214255.1 |
| WGS Project | AELG01 |
| Assembly method | Newbler v. 2.3-PreRelease-10/19/2009 and Phrap |
| Sequencing technology | 454 |
| Tissue | Bombus terrestris |
|---|---|
| Year | 2011 |
| Platform | Roche 454 |
| Layout | SINGLE |
| Raw reads | 1,610,742 |
| Data accession | ERP000936 |
| Assemble software | CAP3 |
| Contigs | 25,146 |
| Annotated | 17,472 |
| Reference | Colgan T J, Carolan J C, Bridgett S J, et al. Polyphenism in social insects: insights from a transcriptome-wide analysis of gene expression in the life stages of the key pollinator, Bombus terrestris[J]. BMC genomics, 2011, 12(1): 623. |
| Download | [Fasta] |
