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Data -> Bombus terrestris

Organism Bombus terrestris
Lineage ;
Resource [Genomic]   [GFF3]   [mRNA]   [Protein]
Data source NCBI
Organism strain
Genomic Size 241 Mb
GC content 42.13%
Number of scaffolds 5,609
Scaffold N50 12,868,932
Number of contigs 10,672
Contig N50 76,043
Gene Set
Gene 21,558
Protein 20,320
BioSample SAMN00009041
Submitter Baylor College of Medicine
Assembly level Chromosome
GenBank assembly accession GCA_000214255.1
RefSeq assembly accession GCF_000214255.1
WGS Project AELG01
Assembly method Newbler v. 2.3-PreRelease-10/19/2009 and Phrap
Sequencing technology 454
Transcriptome 1
Tissue Bombus terrestris
Year 2011
Platform Roche 454
Raw reads 1,610,742
Data accession ERP000936
Assemble software CAP3
Contigs 25,146
Annotated 17,472
Reference Colgan T J, Carolan J C, Bridgett S J, et al. Polyphenism in social insects: insights from a transcriptome-wide analysis of gene expression in the life stages of the key pollinator, Bombus terrestris[J]. BMC genomics, 2011, 12(1): 623.
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