Data -> Anopheles sinensis
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| Resource | [Genomic] [GFF3] [mRNA] [Protein] |
|---|---|
| Data source | NCBI |
| Publication | Neafsey, D., Waterhouse, R., Hall, A.B., Jiang, X., Sharakhov, I.V., Tu, Z., Zwiebel, L. and Besansky, N. 2015. Highly evolvable malaria vectors: The genomes of 16 Anopheles mosquitoes. Science, 347, 1258522. [PDF] |
| Organism strain | |
| Assembly | |
| Genomic Size | 215 Mb |
| GC content | 46.76% |
| Number of scaffolds | 9,592 |
| Scaffold N50 | 814,231 |
| Number of contigs | 27,445 |
| Contig N50 | 30,137 |
| Gene Set | |
| Gene | 19,352 |
| Protein | 19,351 |
| BioSample | SAMN02910229 |
| Submitter | Nanjing Medical University |
| Assembly level | Scaffold |
| GenBank assembly accession | GCA_000441895.2 |
| RefSeq assembly accession | n/a |
| WGS Project | ATLV01 |
| Assembly method | Celera Assembler v. 6.1 |
| Sequencing technology | 454 |
| Tissue | egg, larva, pupa, and adult |
|---|---|
| Year | |
| Platform | |
| Layout | |
| Raw reads | |
| Data accession | SRR651045 |
| Assemble software | CLC Genomics Workbench version 6.0 (CLC Bio) |
| Contigs | 28,133 |
| Annotated | |
| Reference | |
| Download | [Fasta] |
| Tissue | egg, larva, pupa, and adult |
|---|---|
| Year | 2014 |
| Platform | Illumina HiSeq 2000 |
| Layout | PAIRED |
| Raw reads | |
| Data accession | SRR851144 |
| Assemble software | Trinity trinityrnaseq_r2011_10_29 |
| Contigs | 38,463 |
| Annotated | |
| Reference | |
| Download | [Fasta] |
