Data -> Manduca sexta
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| Resource | [Genomic] [GFF3] [mRNA] [Protein] |
|---|---|
| Data source | Manduca Base |
| Publication | |
| Organism strain | |
| Assembly | Manduca Base OGS2 |
| Genomic Size | 367 Mb |
| GC content | 35.26% |
| Number of scaffolds | 2,457 |
| Scaffold N50 | 755,801 |
| Number of contigs | 38,380 |
| Contig N50 | 40,396 |
| Gene Set | Manduca Base OGS2 |
| Gene | 27,529 |
| Protein | 27,402 |
| BioSample | SAMN00779869 |
| Submitter | Human Genome Sequencing Center - BCM |
| Assembly level | Scaffold |
| GenBank assembly accession | GCA_000262585.1 |
| RefSeq assembly accession | n/a |
| WGS Project | AIXA01 |
| Assembly method | Newbler v. 2.3 |
| Sequencing technology | 454 |
| Tissue | antennae |
|---|---|
| Year | 2011 |
| Platform | Roche 454 |
| Layout | SINGLE |
| Raw reads | 156,922 |
| Data accession | ERP000526 |
| Assemble software | Newbler |
| Contigs | 5,290 |
| Annotated | 3,054 |
| Reference | Grosse-Wilde E, Kuebler L S, Bucks S, et al. Antennal transcriptome of Manduca sexta[J]. Proceedings of the National Academy of Sciences, 2011, 108(18): 7449-7454. |
| Download | [Fasta] |
