Data -> Heliconius melpomene
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| Resource | [Genomic] [GFF3] [mRNA] [Protein] |
|---|---|
| Data source | Heliconius Genome Project |
| Publication | Consortium, H. G. Butterfly genome reveals promiscuous exchange of mimicry adaptations among species. Nature (2012). [PDF] |
| Organism strain | |
| Assembly | |
| Genomic Size | 266 Mb |
| GC content | 32.84% |
| Number of scaffolds | 4,309 |
| Scaffold N50 | 194,303 |
| Number of contigs | 14,286 |
| Contig N50 | 7,166 |
| Gene Set | |
| Gene | 15,201 |
| Protein | 12,828 |
| BioSample | SAMEA2272543 |
| Submitter | Heliconius Genome Sequencing Consortium |
| Assembly level | Contig |
| GenBank assembly accession | GCA_000326025.1 |
| RefSeq assembly accession | n/a |
| WGS Project | CAFA01 |
| Assembly method | |
| Sequencing technology |
| Tissue | malleti wing |
|---|---|
| Year | 2010 |
| Platform | Roche 454 |
| Layout | SINGLE |
| Raw reads | 364,223 |
| Data accession | SRP000859 |
| Assemble software | CAP3 |
| Contigs | 35,350 |
| Annotated | 14,575 |
| Reference | Ferguson L, Lee S F, Chamberlain N, et al. Characterization of a hotspot for mimicry: assembly of a butterfly wing transcriptome to genomic sequence at the HmYb/Sb locus[J]. Molecular ecology, 2010, 19(s1): 240-254. |
| Download | [Fasta] |
| Tissue | cythera wing |
|---|---|
| Year | 2010 |
| Platform | Roche 454 |
| Layout | SINGLE |
| Raw reads | 515,527 |
| Data accession | SRP000859 |
| Assemble software | CAP3 |
| Contigs | 36,884 |
| Annotated | 15,600 |
| Reference | Ferguson L, Lee S F, Chamberlain N, et al. Characterization of a hotspot for mimicry: assembly of a butterfly wing transcriptome to genomic sequence at the HmYb/Sb locus[J]. Molecular ecology, 2010, 19(s1): 240-254. |
| Download | [Fasta] |
